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Guidelines
Pathogens
Antimicrobials
Stool culture for routine bacterial pathogens at PHC, should be limited to patients with at least one of the following (2,3):
temperature above 38.5°C
bloody diarrhea
age > 64
hypovolemia
duration of symptoms > 1 week
immunocompromised
severe abdominal pain
above 5 unformed stools per 24 hours
Routine Bacterial Pathogens
Salmonella
Shigella
Campylobacter
E.coli O157:H7
Yersinia
Aeromonas
Vibrio
Plesiomonas
If suspecting Vibrio cholerae, contact the Medical Microbiology laboratory.
Stool for C.difficile PCR if recent antibiotic exposure or chemotherapy
If patient has bloody diarrhea, indicate this on the requisition so that Shiga toxin testing can be performed
If syndrome is compatible with viral gastroenteritis, no testing is required
Management